Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2203 domain-containing protein | AMED_RS04280 | Not Available | Negative | 890315 - 890695 | 13669.4 |
| hypothetical protein | AMED_RS04285 | Not Available | Negative | 890721 - 891242 | 18160.2 |
| nadp-dependent isocitrate dehydrogenase | AMED_RS04290 | Not Available | Positive | 891500 - 892723 | 45460.0 |
| hypothetical protein | AMED_RS04295 | Not Available | Positive | 892905 - 893201 | 10174.3 |
| hypothetical protein | AMED_RS04300 | Not Available | Negative | 893216 - 893764 | 18799.3 |
| tetr/acrr family transcriptional regulator | AMED_RS04305 | Not Available | Negative | 893844 - 894425 | 20495.3 |
| mbl fold metallo-hydrolase | AMED_RS04310 | Not Available | Negative | 894929 - 895687 | 27064.2 |
| exodeoxyribonuclease iii | AMED_RS04315 | Not Available | Positive | 895782 - 896618 | 30816.9 |
| hypothetical protein | AMED_RS04320 | Not Available | Positive | 896935 - 897312 | 12740.8 |
| tryptophan--trna ligase | AMED_RS04325 | Not Available | Positive | 897359 - 898390 | 38289.5 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
