Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS43480 | Not Available | Positive | 9341909 - 9342406 | 17604.6 |
| duf3558 family protein | AMED_RS43485 | Not Available | Positive | 9342403 - 9342963 | 18807.0 |
| hypothetical protein | AMED_RS43490 | Not Available | Positive | 9342978 - 9344426 | 48333.9 |
| phzf family phenazine biosynthesis protein | AMED_RS43495 | Not Available | Positive | 9344491 - 9345240 | 26942.8 |
| yccf domain-containing protein | AMED_RS43500 | Not Available | Positive | 9345240 - 9345614 | 13511.2 |
| metallophosphoesterase | AMED_RS43505 | Not Available | Negative | 9345611 - 9346411 | 29045.8 |
| had-iia family hydrolase | AMED_RS43510 | Not Available | Negative | 9346449 - 9347243 | 28614.0 |
| multicopper oxidase domain-containing protein | AMED_RS43515 | Not Available | Positive | 9347434 - 9348354 | 33744.3 |
| sulfate/molybdate abc transporter atp-binding protein | AMED_RS43520 | Not Available | Negative | 9348546 - 9349613 | 36165.5 |
| abc transporter permease | AMED_RS43525 | Not Available | Negative | 9349610 - 9350377 | 26722.8 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
