Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amp-binding protein | AMED_RS43430 | Not Available | Negative | 9331104 - 9332762 | 60123.9 |
| hypothetical protein | AMED_RS43435 | Not Available | Negative | 9332830 - 9333642 | 27796.3 |
| sige family rna polymerase sigma factor | AMED_RS43440 | Not Available | Negative | 9333639 - 9334169 | 19323.0 |
| ricin domain-containing protein | AMED_RS43445 | Not Available | Negative | 9334276 - 9336966 | 91310.9 |
| aaa family atpase | AMED_RS43450 | Not Available | Positive | 9337067 - 9338686 | 58099.8 |
| duf2997 domain-containing protein | AMED_RS43455 | Not Available | Positive | 9338695 - 9338898 | 7287.2 |
| 4fe-4s single cluster domain-containing protein | AMED_RS43460 | Not Available | Positive | 9338886 - 9339461 | 20630.6 |
| hypothetical protein | AMED_RS43465 | Not Available | Positive | 9339458 - 9339901 | 15538.7 |
| helix-hairpin-helix domain-containing protein | AMED_RS43470 | Not Available | Positive | 9339898 - 9341100 | 41827.4 |
| esx secretion-associated protein espg | AMED_RS43475 | Not Available | Positive | 9341136 - 9341837 | 25882.6 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
