Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sacsin n-terminal atp-binding-like domain-containing protein | AMED_RS43380 | Not Available | Negative | 9320103 - 9322910 | 100052.0 |
| metal-dependent hydrolase | AMED_RS49765 | Not Available | Negative | 9323954 - 9324697 | 26125.5 |
| glutaminyl-peptide cyclotransferase | AMED_RS43390 | Not Available | Positive | 9324749 - 9325516 | 26734.6 |
| mfs transporter | AMED_RS43395 | Not Available | Positive | 9325567 - 9327447 | 65440.3 |
| duf2771 family protein | AMED_RS43400 | Not Available | Positive | 9327457 - 9327933 | 16701.7 |
| cold-shock protein | AMED_RS43405 | Not Available | Negative | 9327930 - 9328316 | 14326.3 |
| hypothetical protein | AMED_RS43410 | Not Available | Positive | 9328550 - 9328786 | 8019.42 |
| had family hydrolase | AMED_RS43415 | Not Available | Negative | 9328783 - 9329400 | 21555.8 |
| tetr/acrr family transcriptional regulator | AMED_RS43420 | Not Available | Positive | 9329495 - 9330079 | 20549.4 |
| r2-like ligand-binding oxidase | AMED_RS43425 | Not Available | Positive | 9330101 - 9331069 | 37076.4 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
