Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate-cysteine ligase family protein | AMED_RS43330 | Not Available | Positive | 9310953 - 9312452 | 56306.9 |
| tetr/acrr family transcriptional regulator | AMED_RS43335 | Not Available | Positive | 9312468 - 9313064 | 21336.7 |
| heme oxygenase (biliverdin-producing) | AMED_RS43340 | Not Available | Positive | 9313138 - 9313797 | 24569.8 |
| superoxide dismutase | AMED_RS43345 | Not Available | Positive | 9314041 - 9314664 | 22868.9 |
| arylamine n-acetyltransferase | AMED_RS43350 | Not Available | Positive | 9314771 - 9315583 | 29334.0 |
| mfs transporter | AMED_RS43355 | Not Available | Negative | 9315821 - 9317077 | 44931.1 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS43360 | Not Available | Negative | 9317191 - 9317622 | 15677.9 |
| hypothetical protein | AMED_RS43365 | Not Available | Positive | 9317730 - 9318311 | 19872.2 |
| ncs2 family permease | AMED_RS43370 | Not Available | Negative | 9318312 - 9319781 | 50463.9 |
| duf2530 domain-containing protein | AMED_RS43375 | Not Available | Positive | 9319864 - 9320091 | 8121.1 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
