Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | AMED_RS43280 | Not Available | Negative | 9302084 - 9302770 | 24412.6 |
| peptidoglycan-binding protein | AMED_RS43285 | Not Available | Negative | 9302767 - 9303861 | 37369.5 |
| hypothetical protein | AMED_RS43290 | Not Available | Negative | 9303873 - 9304415 | 18476.0 |
| response regulator transcription factor | AMED_RS43295 | Not Available | Positive | 9304529 - 9305191 | 23912.9 |
| hamp domain-containing sensor histidine kinase | AMED_RS43300 | Not Available | Positive | 9305188 - 9306336 | 40629.0 |
| septation protein seph | AMED_RS43305 | Not Available | Positive | 9306619 - 9307464 | 31150.3 |
| mmcq/yjbr family dna-binding protein | AMED_RS43310 | Not Available | Negative | 9307472 - 9307822 | 13464.1 |
| hypothetical protein | AMED_RS43315 | Not Available | Positive | 9307863 - 9309296 | 51978.5 |
| duf2537 domain-containing protein | AMED_RS43320 | Not Available | Negative | 9309293 - 9309904 | 21043.7 |
| rna methyltransferase | AMED_RS43325 | Not Available | Negative | 9309936 - 9310742 | 27845.6 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
