Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | AMED_RS43230 | Not Available | Positive | 9291287 - 9292126 | 30040.7 |
| abc transporter permease | AMED_RS43235 | Not Available | Positive | 9292123 - 9292941 | 28751.9 |
| sensor histidine kinase | AMED_RS43240 | Not Available | Positive | 9292938 - 9294095 | 41395.0 |
| response regulator transcription factor | AMED_RS43245 | Not Available | Positive | 9294092 - 9294712 | 21840.6 |
| serine hydrolase | AMED_RS43250 | Not Available | Positive | 9294914 - 9296254 | 47283.2 |
| hypothetical protein | AMED_RS43255 | Not Available | Negative | 9296302 - 9296619 | 10952.3 |
| phosphoserine transaminase | AMED_RS43260 | Not Available | Positive | 9296825 - 9297949 | 40004.9 |
| glycosyltransferase 87 family protein | AMED_RS43265 | Not Available | Negative | 9297942 - 9299132 | 41826.9 |
| amidohydrolase family protein | AMED_RS43270 | Not Available | Negative | 9299213 - 9300736 | 54251.5 |
| abc transporter permease | AMED_RS43275 | Not Available | Negative | 9300882 - 9302087 | 40800.0 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
