Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldose 1-epimerase family protein | AMED_RS43130 | Not Available | Negative | 9271350 - 9272255 | 32758.4 |
| protease pro-enzyme activation domain-containing protein | AMED_RS43135 | Not Available | Negative | 9272293 - 9273873 | 53671.0 |
| tetr/acrr family transcriptional regulator | AMED_RS43140 | Not Available | Positive | 9273994 - 9274572 | 20463.1 |
| mbl fold metallo-hydrolase | AMED_RS43145 | Not Available | Positive | 9274572 - 9275405 | 30612.3 |
| mbl fold metallo-hydrolase | AMED_RS43150 | Not Available | Positive | 9275402 - 9276226 | 29492.1 |
| duf3558 family protein | AMED_RS43155 | Not Available | Negative | 9276231 - 9276791 | 18620.1 |
| mfs transporter | AMED_RS43160 | Not Available | Negative | 9276868 - 9278154 | 44845.1 |
| pyridoxamine 5'-phosphate oxidase | AMED_RS43165 | Not Available | Negative | 9278308 - 9278985 | 25400.7 |
| cytosine permease | AMED_RS43170 | Not Available | Positive | 9279214 - 9280896 | 58834.1 |
| tetr/acrr family transcriptional regulator | AMED_RS43175 | Not Available | Negative | 9280943 - 9281653 | 25916.9 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
