Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | AMED_RS04230 | Not Available | Negative | 883365 - 884549 | 39984.3 |
| helix-turn-helix transcriptional regulator | AMED_RS04235 | Not Available | Negative | 884734 - 885057 | 11527.1 |
| mfs transporter | AMED_RS04240 | Not Available | Positive | 885166 - 886344 | 39317.8 |
| duf1918 domain-containing protein | AMED_RS04245 | Not Available | Negative | 886341 - 886529 | 6564.59 |
| trmh family rna methyltransferase | AMED_RS04250 | Not Available | Positive | 886727 - 887161 | 15301.8 |
| hhh-gpd-type base excision dna repair protein | AMED_RS04255 | Not Available | Negative | 887204 - 887785 | 21045.5 |
| arac family transcriptional regulator | AMED_RS04260 | Not Available | Negative | 887853 - 888629 | 28412.0 |
| duf2000 domain-containing protein | AMED_RS04265 | Not Available | Positive | 888680 - 889093 | 14605.5 |
| hypothetical protein | AMED_RS04270 | Not Available | Positive | 889201 - 889686 | 16916.5 |
| class i sam-dependent methyltransferase | AMED_RS04275 | Not Available | Negative | 889688 - 890305 | 21274.2 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
