Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | AMED_RS43030 | Not Available | Positive | 9252311 - 9253174 | 30384.3 |
| s-(hydroxymethyl)mycothiol dehydrogenase | AMED_RS43035 | Not Available | Positive | 9253396 - 9254493 | 38706.2 |
| gamma-glutamylcyclotransferase family protein | AMED_RS43040 | Not Available | Positive | 9254559 - 9255113 | 19610.3 |
| fad-binding oxidoreductase | AMED_RS43045 | Not Available | Negative | 9255091 - 9256509 | 49679.6 |
| tetr/acrr family transcriptional regulator | AMED_RS43050 | Not Available | Positive | 9256808 - 9257371 | 20202.6 |
| glycerol-3-phosphate dehydrogenase/oxidase | AMED_RS43055 | Not Available | Positive | 9257368 - 9258909 | 53314.2 |
| helix-turn-helix transcriptional regulator | AMED_RS43060 | Not Available | Positive | 9259102 - 9259371 | 9829.87 |
| duf6498-containing protein | AMED_RS43065 | Not Available | Positive | 9259368 - 9259916 | 20469.0 |
| abc transporter atp-binding protein | AMED_RS43070 | Not Available | Positive | 9259909 - 9260835 | 32876.3 |
| abc transporter permease | AMED_RS43075 | Not Available | Positive | 9260832 - 9262022 | 41690.6 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
