Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent transcriptional regulator | AMED_RS42930 | Not Available | Negative | 9232578 - 9233261 | 24602.4 |
| gnat family n-acetyltransferase | AMED_RS42935 | Not Available | Negative | 9233302 - 9233742 | 16658.6 |
| hypothetical protein | AMED_RS49325 | Not Available | Positive | 9233763 - 9234119 | 12837.6 |
| amidohydrolase | AMED_RS42945 | Not Available | Negative | 9234124 - 9235725 | 56212.6 |
| enoyl-coa hydratase/isomerase family protein | AMED_RS42950 | Not Available | Positive | 9235828 - 9236565 | 25700.0 |
| atp-dependent acyl-coa ligase | AMED_RS42955 | Not Available | Positive | 9236562 - 9238085 | 55552.3 |
| tetr/acrr family transcriptional regulator | AMED_RS42960 | Not Available | Positive | 9238076 - 9238717 | 22926.5 |
| hypothetical protein | AMED_RS42965 | Not Available | Positive | 9238776 - 9239096 | 12005.0 |
| acyl-coa dehydrogenase family protein | AMED_RS42970 | Not Available | Negative | 9239218 - 9240387 | 43594.0 |
| 4'-phosphopantetheinyl transferase superfamily protein | AMED_RS42975 | Not Available | Positive | 9240515 - 9241204 | 24909.6 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
