Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lamb/ycsf family protein | AMED_RS42880 | Not Available | Positive | 9225714 - 9226466 | 25870.7 |
| allophanate hydrolase subunit 1 | AMED_RS42885 | Not Available | Positive | 9226463 - 9227074 | 21288.4 |
| biotin-dependent carboxyltransferase family protein | AMED_RS42890 | Not Available | Positive | 9227071 - 9227904 | 28496.4 |
| hypothetical protein | AMED_RS42895 | Not Available | Negative | 9227938 - 9228177 | 8815.55 |
| hypothetical protein | AMED_RS42900 | Not Available | Negative | 9228170 - 9228523 | 12418.3 |
| transcriptional regulator | AMED_RS42905 | Not Available | Positive | 9228607 - 9229188 | 21730.6 |
| alpha-ketoglutarate-dependent dioxygenase alkb | AMED_RS42910 | Not Available | Negative | 9229185 - 9229811 | 22524.8 |
| alcohol dehydrogenase catalytic domain-containing protein | AMED_RS42915 | Not Available | Negative | 9230123 - 9231181 | 35983.3 |
| hypothetical protein | AMED_RS42920 | Not Available | Negative | 9231211 - 9231543 | 12208.8 |
| llm class flavin-dependent oxidoreductase | AMED_RS42925 | Not Available | Negative | 9231616 - 9232434 | 28922.4 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
