Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| paax family transcriptional regulator c-terminal domain-containing protein | AMED_RS42780 | Not Available | Positive | 9201057 - 9201911 | 31558.6 |
| rida family protein | AMED_RS42785 | Not Available | Negative | 9201898 - 9202293 | 13839.6 |
| bifunctional salicylyl-coa 5-hydroxylase/oxidoreductase | AMED_RS42790 | Not Available | Positive | 9202360 - 9204702 | 85297.6 |
| acyl-coa dehydrogenase family protein | AMED_RS42795 | Not Available | Positive | 9204699 - 9205862 | 40454.1 |
| duf2306 domain-containing protein | AMED_RS42800 | Not Available | Negative | 9205810 - 9206433 | 22913.8 |
| gh1 family beta-glucosidase | AMED_RS42805 | Not Available | Negative | 9206619 - 9208022 | 52046.5 |
| abc transporter atp-binding protein | AMED_RS42810 | Not Available | Negative | 9208057 - 9209055 | 36241.1 |
| abc transporter permease | AMED_RS42815 | Not Available | Negative | 9209055 - 9210047 | 35027.9 |
| abc transporter permease | AMED_RS42820 | Not Available | Negative | 9210049 - 9211029 | 35182.2 |
| abc transporter atp-binding protein | AMED_RS42825 | Not Available | Negative | 9211026 - 9212093 | 38876.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
