Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase domain-containing protein | AMED_RS42730 | Not Available | Negative | 9192723 - 9193682 | 34903.7 |
| oxygenase mpab family protein | AMED_RS42735 | Not Available | Negative | 9193714 - 9194517 | 29414.4 |
| lysr family transcriptional regulator | AMED_RS42740 | Not Available | Negative | 9194564 - 9195448 | 30605.2 |
| fad-binding oxidoreductase | AMED_RS42745 | Not Available | Positive | 9195539 - 9196831 | 45251.7 |
| acyltransferase | AMED_RS42750 | Not Available | Positive | 9196921 - 9198081 | 43295.6 |
| nitroreductase family deazaflavin-dependent oxidoreductase | AMED_RS42755 | Not Available | Negative | 9198078 - 9198500 | 15249.2 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS42760 | Not Available | Positive | 9198600 - 9199064 | 16589.1 |
| pldc n-terminal domain-containing protein | AMED_RS42765 | Not Available | Negative | 9199068 - 9199427 | 13624.5 |
| hypothetical protein | AMED_RS42770 | Not Available | Negative | 9199485 - 9200144 | 22334.8 |
| gnat family n-acetyltransferase | AMED_RS42775 | Not Available | Negative | 9200327 - 9201004 | 24144.9 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
