Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine-protein kinase | AMED_RS42680 | Not Available | Negative | 9183724 - 9185208 | 52344.8 |
| inositol monophosphatase family protein | AMED_RS42685 | Not Available | Negative | 9185347 - 9186147 | 27770.9 |
| creatininase family protein | AMED_RS42690 | Not Available | Positive | 9186176 - 9186874 | 24098.7 |
| gtp cyclohydrolase ii | AMED_RS42695 | Not Available | Negative | 9186863 - 9187525 | 23700.4 |
| lysylphosphatidylglycerol synthase transmembrane domain-containing protein | AMED_RS42700 | Not Available | Negative | 9187522 - 9188541 | 34796.3 |
| methyltransferase domain-containing protein | AMED_RS42705 | Not Available | Negative | 9188538 - 9189365 | 29237.8 |
| glycosyltransferase family 4 protein | AMED_RS42710 | Not Available | Negative | 9189362 - 9190429 | 37647.2 |
| 6-carboxytetrahydropterin synthase | AMED_RS42715 | Not Available | Negative | 9190426 - 9190824 | 14478.0 |
| zinc-binding alcohol dehydrogenase | AMED_RS42720 | Not Available | Negative | 9190856 - 9191818 | 33946.8 |
| cdp-alcohol phosphatidyltransferase family protein | AMED_RS42725 | Not Available | Positive | 9191886 - 9192656 | 27359.1 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
