Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | AMED_RS42630 | Not Available | Negative | 9171493 - 9172146 | 23248.3 |
| class i sam-dependent methyltransferase | AMED_RS42635 | Not Available | Positive | 9172877 - 9173992 | 40646.4 |
| Trna-arg | Not Available | Not Available | Positive | 9174150 - 9174225 | Not Available |
| hypothetical protein | AMED_RS42645 | Not Available | Negative | 9174326 - 9174487 | 5082.24 |
| mfs transporter | AMED_RS42650 | Not Available | Negative | 9174578 - 9175852 | 42850.2 |
| lysr family transcriptional regulator | AMED_RS42655 | Not Available | Positive | 9175923 - 9176837 | 32373.6 |
| aldo/keto reductase | AMED_RS42660 | Not Available | Negative | 9176765 - 9177760 | 35850.4 |
| plp-dependent aminotransferase family protein | AMED_RS42665 | Not Available | Positive | 9177808 - 9179130 | 46718.0 |
| gh92 family glycosyl hydrolase | AMED_RS42670 | Not Available | Positive | 9179223 - 9182459 | 113807.0 |
| glycosyltransferase family 4 protein | AMED_RS42675 | Not Available | Negative | 9182541 - 9183599 | 37153.8 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
