Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2064 domain-containing protein | AMED_RS42580 | Not Available | Positive | 9161914 - 9162597 | 22953.8 |
| class i sam-dependent methyltransferase | AMED_RS42585 | Not Available | Positive | 9162597 - 9163229 | 22681.0 |
| molybdopterin-dependent oxidoreductase | AMED_RS42590 | Not Available | Positive | 9163226 - 9164341 | 39764.5 |
| hypothetical protein | AMED_RS42595 | Not Available | Positive | 9164338 - 9164967 | 21502.2 |
| s1c family serine protease | AMED_RS42600 | Not Available | Negative | 9165118 - 9166533 | 47029.7 |
| galactose-1-phosphate uridylyltransferase | AMED_RS42605 | Not Available | Negative | 9166606 - 9167688 | 40001.3 |
| deor/glpr family dna-binding transcription regulator | AMED_RS42610 | Not Available | Negative | 9167685 - 9168485 | 27988.4 |
| cell wall metabolism sensor histidine kinase walk | AMED_RS42615 | Not Available | Negative | 9168716 - 9170125 | 49935.5 |
| response regulator transcription factor | AMED_RS42620 | Not Available | Negative | 9170122 - 9170814 | 25672.8 |
| trimeric intracellular cation channel family protein | AMED_RS42625 | Not Available | Negative | 9170881 - 9171489 | 20673.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
