Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hd domain-containing protein | AMED_RS04180 | Not Available | Positive | 870140 - 870688 | 19704.5 |
| hypothetical protein | AMED_RS04185 | Not Available | Positive | 870843 - 871538 | 23386.3 |
| dna polymerase y family protein | AMED_RS04190 | Not Available | Positive | 872002 - 873564 | 55258.1 |
| hypothetical protein | AMED_RS04195 | Not Available | Positive | 873567 - 874097 | 19749.6 |
| error-prone dna polymerase | AMED_RS04200 | Not Available | Positive | 874098 - 877409 | 121458.0 |
| class i sam-dependent methyltransferase | AMED_RS04205 | Not Available | Negative | 877381 - 878130 | 27813.1 |
| pentapeptide repeat-containing protein | AMED_RS04210 | Not Available | Positive | 878259 - 878846 | 20986.8 |
| glycohydrolase toxin tnt-related protein | AMED_RS04215 | Not Available | Negative | 878893 - 881913 | 109550.0 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase | AMED_RS04220 | Not Available | Positive | 882137 - 882991 | 29517.8 |
| duf3017 domain-containing protein | AMED_RS04225 | Not Available | Positive | 882991 - 883314 | 11296.2 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
