Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| saf domain-containing protein | AMED_RS42535 | Not Available | Positive | 9153623 - 9154240 | 21034.9 |
| large-conductance mechanosensitive channel protein mscl | AMED_RS42540 | Not Available | Positive | 9154298 - 9154714 | 15019.3 |
| hypothetical protein | AMED_RS48180 | Not Available | Negative | 9154721 - 9154891 | 6726.6 |
| molybdenum cofactor biosynthesis protein b | AMED_RS42545 | Not Available | Negative | 9155020 - 9155520 | 16750.0 |
| nad-dependent epimerase/dehydratase family protein | AMED_RS42550 | Not Available | Positive | 9155644 - 9156705 | 37352.2 |
| metal-dependent hydrolase | AMED_RS42555 | Not Available | Negative | 9156976 - 9157883 | 31840.3 |
| sensor histidine kinase kdpd | AMED_RS42560 | Not Available | Negative | 9157958 - 9159007 | 37034.3 |
| response regulator transcription factor | AMED_RS42565 | Not Available | Negative | 9159004 - 9159705 | 25923.3 |
| hypothetical protein | AMED_RS42570 | Not Available | Negative | 9159716 - 9161113 | 48934.3 |
| glycosyltransferase family 2 protein | AMED_RS42575 | Not Available | Positive | 9161273 - 9161917 | 22618.4 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
