Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS42485 | Not Available | Positive | 9139422 - 9142523 | 111491.0 |
| dead/deah box helicase | AMED_RS42490 | Not Available | Positive | 9142520 - 9147223 | 170837.0 |
| hypothetical protein | AMED_RS42495 | Not Available | Negative | 9147276 - 9147662 | 14198.7 |
| Trna-ala | Not Available | Not Available | Positive | 9148511 - 9148586 | Not Available |
| gephyrin-like molybdotransferase receptor glpr | AMED_RS42505 | Not Available | Negative | 9148641 - 9149480 | 31184.8 |
| gnat family n-acetyltransferase | AMED_RS42510 | Not Available | Negative | 9149644 - 9150312 | 24501.2 |
| gephyrin-like molybdotransferase glp | AMED_RS42515 | Not Available | Negative | 9150312 - 9151589 | 44481.2 |
| utp--glucose-1-phosphate uridylyltransferase | AMED_RS42520 | Not Available | Negative | 9151586 - 9152491 | 31962.2 |
| 5-formyltetrahydrofolate cyclo-ligase | AMED_RS42525 | Not Available | Positive | 9152516 - 9153106 | 20606.6 |
| fmdb family zinc ribbon protein | AMED_RS42530 | Not Available | Positive | 9153193 - 9153492 | 10449.9 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
