Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioesterase ii family protein | AMED_RS42435 | Not Available | Positive | 9125284 - 9126045 | 27954.6 |
| lyse family translocator | AMED_RS42440 | Not Available | Positive | 9126048 - 9126662 | 21617.2 |
| hypothetical protein | AMED_RS42445 | Not Available | Positive | 9126943 - 9127302 | 13746.5 |
| serine/threonine-protein kinase | AMED_RS42450 | Not Available | Positive | 9127377 - 9129524 | 77185.2 |
| helix-turn-helix domain-containing protein | AMED_RS42455 | Not Available | Positive | 9130249 - 9130680 | 16104.8 |
| hypothetical protein | AMED_RS42460 | Not Available | Negative | 9131465 - 9131671 | 7545.62 |
| aipr family protein | AMED_RS42465 | Not Available | Negative | 9132051 - 9133781 | 65095.5 |
| atp-binding protein | AMED_RS42470 | Not Available | Negative | 9133807 - 9137064 | 117844.0 |
| hypothetical protein | AMED_RS42475 | Not Available | Negative | 9137061 - 9137696 | 23496.1 |
| hypothetical protein | AMED_RS42480 | Not Available | Negative | 9138027 - 9138278 | 8163.73 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
