Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | AMED_RS42385 | Not Available | Positive | 9113144 - 9113821 | 24568.4 |
| cell wall metabolism sensor histidine kinase walk | AMED_RS42390 | Not Available | Positive | 9113832 - 9114929 | 39594.3 |
| d-ala-d-ala dipeptidase vanx | AMED_RS42395 | Not Available | Negative | 9114893 - 9115501 | 22860.8 |
| d-alanine--(r)-lactate ligase | AMED_RS42400 | Not Available | Negative | 9115498 - 9116526 | 35938.0 |
| d-isomer specific 2-hydroxyacid dehydrogenase family protein | AMED_RS42405 | Not Available | Negative | 9116519 - 9117493 | 34925.9 |
| plp-dependent cysteine synthase family protein | AMED_RS42410 | Not Available | Negative | 9117649 - 9118638 | 34908.1 |
| helix-turn-helix domain-containing protein | AMED_RS42415 | Not Available | Negative | 9118635 - 9119294 | 23762.9 |
| maly/patb family protein | AMED_RS42420 | Not Available | Negative | 9119307 - 9120506 | 43668.4 |
| non-ribosomal peptide synthetase | AMED_RS42425 | Not Available | Positive | 9120651 - 9125027 | 158811.0 |
| acyl carrier protein | AMED_RS42430 | Not Available | Positive | 9125024 - 9125287 | 9267.96 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
