Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mmpl family transporter | AMED_RS42335 | Not Available | Positive | 9102074 - 9104212 | 75064.1 |
| dmt family transporter | AMED_RS42340 | Not Available | Positive | 9104240 - 9104818 | 19906.8 |
| bifunctional diguanylate cyclase/phosphodiesterase | AMED_RS42345 | Not Available | Negative | 9104761 - 9106914 | 78153.5 |
| hypothetical protein | AMED_RS42350 | Not Available | Negative | 9106935 - 9107075 | 4618.63 |
| cytochrome p450 | AMED_RS42355 | Not Available | Positive | 9107301 - 9108599 | 48235.4 |
| para family protein | AMED_RS42360 | Not Available | Positive | 9108708 - 9109649 | 34416.1 |
| hypothetical protein | AMED_RS42365 | Not Available | Positive | 9109646 - 9110263 | 22040.5 |
| hypothetical protein | AMED_RS42370 | Not Available | Positive | 9110260 - 9111612 | 50054.7 |
| nad(p)h-binding protein | AMED_RS42375 | Not Available | Positive | 9111733 - 9112578 | 29642.9 |
| d-alanyl-d-alanine carboxypeptidase family protein | AMED_RS42380 | Not Available | Negative | 9112579 - 9113055 | 17279.0 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
