Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc-binding dehydrogenase | AMED_RS42235 | Not Available | Negative | 9082483 - 9083439 | 33031.7 |
| qsdr family transcriptional regulator | AMED_RS42240 | Not Available | Positive | 9083482 - 9084021 | 19412.4 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | AMED_RS42245 | Not Available | Negative | 9084014 - 9084850 | 29258.1 |
| dolichyl-phosphate-mannose--protein mannosyltransferase | AMED_RS42250 | Not Available | Positive | 9084918 - 9086486 | 58765.1 |
| helix-turn-helix transcriptional regulator | AMED_RS42255 | Not Available | Negative | 9086591 - 9087304 | 25504.0 |
| class i sam-dependent methyltransferase | AMED_RS42260 | Not Available | Positive | 9087381 - 9087950 | 20583.0 |
| serine/threonine-protein kinase | AMED_RS42265 | Not Available | Negative | 9087947 - 9089716 | 62120.2 |
| propionyl-coa synthetase | AMED_RS42270 | Not Available | Positive | 9089902 - 9091773 | 67730.6 |
| beta-n-acetylhexosaminidase | AMED_RS42275 | Not Available | Positive | 9091840 - 9093405 | 56423.9 |
| tetr/acrr family transcriptional regulator | AMED_RS42280 | Not Available | Negative | 9093449 - 9094051 | 21097.2 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
