Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine abc transporter atp-binding protein | AMED_RS42185 | Not Available | Negative | 9071300 - 9072313 | 34867.8 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | AMED_RS42190 | Not Available | Negative | 9072752 - 9073588 | 29330.5 |
| resuscitation-promoting factor | AMED_RS42195 | Not Available | Negative | 9073701 - 9075128 | 50555.4 |
| tatd family hydrolase | AMED_RS42200 | Not Available | Negative | 9075417 - 9076253 | 30325.8 |
| methionine--trna ligase | AMED_RS42205 | Not Available | Negative | 9076264 - 9078060 | 66479.9 |
| padr family transcriptional regulator | AMED_RS42210 | Not Available | Positive | 9078113 - 9078712 | 22226.8 |
| atp-binding cassette domain-containing protein | AMED_RS42215 | Not Available | Positive | 9078796 - 9079773 | 34703.6 |
| abc transporter permease | AMED_RS42220 | Not Available | Positive | 9079763 - 9080527 | 27839.0 |
| glycoside hydrolase family 25 protein | AMED_RS42225 | Not Available | Positive | 9080607 - 9081221 | 22544.5 |
| aminodeoxychorismate synthase component i | AMED_RS42230 | Not Available | Positive | 9081241 - 9082506 | 43773.0 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
