Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent oxidoreductase | AMED_RS42135 | Not Available | Negative | 9061964 - 9062605 | 22594.5 |
| hypothetical protein | AMED_RS42140 | Not Available | Negative | 9062704 - 9063798 | 37444.2 |
| 50s ribosomal protein l25/general stress protein ctc | AMED_RS42145 | Not Available | Positive | 9064150 - 9064749 | 21348.3 |
| aminoacyl-trna hydrolase | AMED_RS42150 | Not Available | Positive | 9064759 - 9065352 | 20947.1 |
| diviva domain-containing protein | AMED_RS49630 | Not Available | Positive | 9065374 - 9065694 | 12109.2 |
| diviva domain-containing protein | AMED_RS42160 | Not Available | Positive | 9065886 - 9066242 | 13011.3 |
| fatty acyl-amp ligase | AMED_RS42165 | Not Available | Negative | 9066309 - 9068066 | 62432.8 |
| abc-f family atp-binding cassette domain-containing protein | AMED_RS42170 | Not Available | Negative | 9068092 - 9069858 | 64024.7 |
| asch domain-containing protein | AMED_RS42175 | Not Available | Negative | 9069863 - 9070270 | 14776.5 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | AMED_RS42180 | Not Available | Negative | 9070267 - 9071229 | 32745.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
