Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS04130 | Not Available | Positive | 860395 - 860718 | 11373.5 |
| adp-forming succinate--coa ligase subunit beta | AMED_RS04135 | Not Available | Positive | 860837 - 862006 | 40737.5 |
| succinate--coa ligase subunit alpha | AMED_RS04140 | Not Available | Positive | 862008 - 862898 | 30391.6 |
| duf5336 domain-containing protein | AMED_RS04145 | Not Available | Positive | 863169 - 863969 | 26750.8 |
| duf6350 family protein | AMED_RS04150 | Not Available | Positive | 864106 - 865599 | 49673.3 |
| phosphoribosylglycinamide formyltransferase | AMED_RS04155 | Not Available | Positive | 865677 - 866294 | 21873.3 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | AMED_RS04160 | Not Available | Positive | 866284 - 867852 | 54940.7 |
| hypothetical protein | AMED_RS04165 | Not Available | Positive | 868006 - 868785 | 26946.0 |
| hypothetical protein | AMED_RS04170 | Not Available | Negative | 868782 - 869552 | 26443.3 |
| n-acetyltransferase | AMED_RS04175 | Not Available | Negative | 869598 - 870086 | 18108.7 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
