Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription-repair coupling factor | AMED_RS42035 | Not Available | Negative | 9042099 - 9045653 | 128267.0 |
| llm class flavin-dependent oxidoreductase | AMED_RS42040 | Not Available | Negative | 9045738 - 9046655 | 32945.4 |
| helix-turn-helix transcriptional regulator | AMED_RS42045 | Not Available | Positive | 9046730 - 9047503 | 28202.0 |
| deda family protein | AMED_RS42050 | Not Available | Negative | 9047479 - 9047967 | 16942.2 |
| class i sam-dependent methyltransferase | AMED_RS42055 | Not Available | Negative | 9047939 - 9048535 | 21036.3 |
| sensor histidine kinase | AMED_RS42060 | Not Available | Positive | 9048679 - 9049785 | 40041.7 |
| response regulator transcription factor | AMED_RS42065 | Not Available | Positive | 9049782 - 9050438 | 23859.2 |
| sorbosone dehydrogenase family protein | AMED_RS42070 | Not Available | Positive | 9050528 - 9051709 | 41074.8 |
| serine hydrolase | AMED_RS42075 | Not Available | Negative | 9051957 - 9052841 | 30940.7 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS42080 | Not Available | Negative | 9052992 - 9053720 | 24625.0 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
