Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ppox class f420-dependent oxidoreductase | AMED_RS41980 | Not Available | Positive | 9034071 - 9034481 | 15531.3 |
| hypothetical protein | AMED_RS41985 | Not Available | Negative | 9034503 - 9035066 | 19267.4 |
| hypothetical protein | AMED_RS41990 | Not Available | Negative | 9035063 - 9036412 | 47512.8 |
| abc transporter atp-binding protein | AMED_RS41995 | Not Available | Negative | 9036409 - 9037212 | 28554.6 |
| zf-hc2 domain-containing protein | AMED_RS42000 | Not Available | Negative | 9037248 - 9038036 | 28095.9 |
| rna polymerase sigma factor | AMED_RS42005 | Not Available | Negative | 9038033 - 9038590 | 20147.2 |
| mazg family protein | AMED_RS42010 | Not Available | Negative | 9038645 - 9039577 | 32928.1 |
| hypothetical protein | AMED_RS42015 | Not Available | Negative | 9039574 - 9040599 | 35811.6 |
| hypothetical protein | AMED_RS42020 | Not Available | Positive | 9040685 - 9041092 | 14825.7 |
| helix-turn-helix transcriptional regulator | AMED_RS42030 | Not Available | Negative | 9041159 - 9042001 | 31462.1 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
