Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| septum formation initiator family protein | AMED_RS41930 | Not Available | Negative | 9024760 - 9025122 | 13219.7 |
| phosphopyruvate hydratase | AMED_RS41935 | Not Available | Negative | 9025317 - 9026603 | 45514.6 |
| glyoxalase/bleomycin resistance/extradiol dioxygenase family protein | AMED_RS41940 | Not Available | Negative | 9026691 - 9027137 | 16134.5 |
| tetratricopeptide repeat protein | AMED_RS41945 | Not Available | Positive | 9027210 - 9027614 | 15139.2 |
| murein transglycosylase | AMED_RS41950 | Not Available | Negative | 9027835 - 9028581 | 26135.6 |
| iron uptake transporter permease efeu | AMED_RS41955 | Not Available | Positive | 9029017 - 9029862 | 29731.8 |
| iron uptake system protein efeo | AMED_RS41960 | Not Available | Positive | 9029859 - 9031004 | 40228.1 |
| iron uptake transporter deferrochelatase/peroxidase subunit | AMED_RS41965 | Not Available | Positive | 9031001 - 9032275 | 45032.0 |
| tetr/acrr family transcriptional regulator | AMED_RS41970 | Not Available | Positive | 9032338 - 9032907 | 20271.1 |
| gdsl-type esterase/lipase family protein | AMED_RS41975 | Not Available | Positive | 9032904 - 9034037 | 39891.6 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
