Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s10 family peptidase | AMED_RS41880 | Not Available | Positive | 9012451 - 9013944 | 54827.4 |
| s8 family serine peptidase | AMED_RS41885 | Not Available | Negative | 9014103 - 9015827 | 59656.7 |
| abc transporter atp-binding protein | AMED_RS41890 | Not Available | Negative | 9015902 - 9016939 | 37630.4 |
| abc transporter atp-binding protein | AMED_RS41895 | Not Available | Negative | 9016926 - 9017927 | 36281.0 |
| abc transporter permease | AMED_RS41900 | Not Available | Negative | 9017934 - 9018887 | 33502.9 |
| abc transporter permease | AMED_RS41905 | Not Available | Negative | 9018880 - 9019809 | 33243.3 |
| abc transporter substrate-binding protein | AMED_RS41910 | Not Available | Negative | 9019901 - 9021529 | 58735.3 |
| ppx/gppa phosphatase family protein | AMED_RS41915 | Not Available | Negative | 9021824 - 9022777 | 33490.7 |
| lytic transglycosylase domain-containing protein | AMED_RS41920 | Not Available | Negative | 9022805 - 9023983 | 40323.5 |
| duf501 domain-containing protein | AMED_RS41925 | Not Available | Negative | 9024124 - 9024633 | 18304.9 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
