Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS41830 | Not Available | Positive | 9003764 - 9004675 | 31589.3 |
| cupin domain-containing protein | AMED_RS41835 | Not Available | Positive | 9004722 - 9005189 | 16983.2 |
| Trna-leu | Not Available | Not Available | Positive | 9005648 - 9005724 | Not Available |
| hypothetical protein | AMED_RS41845 | Not Available | Negative | 9005773 - 9007905 | 79327.0 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | AMED_RS41850 | Not Available | Negative | 9007902 - 9008765 | 30369.5 |
| nrtr dna-binding winged helix domain-containing protein | AMED_RS41855 | Not Available | Positive | 9009017 - 9009727 | 26174.8 |
| hypothetical protein | AMED_RS41860 | Not Available | Positive | 9009807 - 9009974 | 5353.4 |
| nad(p)/fad-dependent oxidoreductase | AMED_RS41865 | Not Available | Negative | 9010028 - 9011362 | 48632.0 |
| uracil-dna glycosylase | AMED_RS41870 | Not Available | Negative | 9011447 - 9012130 | 24287.2 |
| hypothetical protein | AMED_RS41875 | Not Available | Negative | 9012127 - 9012393 | 9640.34 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
