Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system pemk/mazf family toxin | AMED_RS41780 | Not Available | Positive | 8995144 - 8995731 | 20951.6 |
| hypothetical protein | AMED_RS41785 | Not Available | Positive | 8995767 - 8996327 | 20541.6 |
| ybfb/yjij family mfs transporter | AMED_RS41790 | Not Available | Negative | 8996499 - 8998367 | 64959.5 |
| tetr/acrr family transcriptional regulator | AMED_RS41795 | Not Available | Positive | 8998444 - 8999031 | 21051.1 |
| rna polymerase sigma factor | AMED_RS41800 | Not Available | Positive | 8999324 - 8999836 | 18635.5 |
| hypothetical protein | AMED_RS41805 | Not Available | Positive | 8999826 - 9000308 | 17107.2 |
| m43 family zinc metalloprotease | AMED_RS41810 | Not Available | Negative | 9000346 - 9001236 | 32005.1 |
| hypothetical protein | AMED_RS41815 | Not Available | Positive | 9002060 - 9002236 | 6368.61 |
| alpha/beta hydrolase | AMED_RS41820 | Not Available | Positive | 9002312 - 9003214 | 32727.3 |
| peptidase inhibitor family i36 protein | AMED_RS41825 | Not Available | Positive | 9003241 - 9003702 | 16039.3 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
