Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS41730 | Not Available | Negative | 8983613 - 8984617 | 36618.2 |
| fxsxx-cooh system tetratricopeptide repeat protein | AMED_RS41735 | Not Available | Negative | 8984639 - 8988433 | 136069.0 |
| hypothetical protein | AMED_RS41740 | Not Available | Negative | 8988475 - 8988636 | 5827.71 |
| fxsb family cyclophane-forming radical sam/spasm peptide maturase | AMED_RS41745 | Not Available | Positive | 8988814 - 8989935 | 40335.5 |
| hexxh motif domain-containing protein | AMED_RS41750 | Not Available | Positive | 8989932 - 8991173 | 43817.5 |
| rna polymerase sigma factor | AMED_RS41755 | Not Available | Negative | 8991307 - 8991861 | 20382.5 |
| serine/threonine-protein kinase | AMED_RS41760 | Not Available | Positive | 8991904 - 8993265 | 49023.2 |
| hypothetical protein | AMED_RS41765 | Not Available | Positive | 8993343 - 8993714 | 12859.2 |
| hypothetical protein | AMED_RS41770 | Not Available | Positive | 8993754 - 8994494 | 26444.1 |
| hypothetical protein | AMED_RS41775 | Not Available | Positive | 8994567 - 8995058 | 16745.7 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
