Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| btad domain-containing putative transcriptional regulator | AMED_RS41680 | Not Available | Positive | 8968899 - 8972069 | 111294.0 |
| fad-dependent monooxygenase | AMED_RS41685 | Not Available | Positive | 8972145 - 8973641 | 53356.7 |
| hypothetical protein | AMED_RS41690 | Not Available | Negative | 8973714 - 8973923 | 6928.22 |
| luxr family transcriptional regulator | AMED_RS41695 | Not Available | Positive | 8974168 - 8976975 | 98190.7 |
| duf6328 family protein | AMED_RS41700 | Not Available | Negative | 8976972 - 8977514 | 20217.8 |
| rna methyltransferase | AMED_RS41705 | Not Available | Positive | 8977608 - 8978357 | 26694.8 |
| hypothetical protein | AMED_RS41710 | Not Available | Positive | 8978557 - 8979291 | 26640.6 |
| hypothetical protein | AMED_RS41715 | Not Available | Positive | 8979288 - 8980232 | 35518.3 |
| atp-binding protein | AMED_RS41720 | Not Available | Positive | 8980238 - 8982511 | 82563.9 |
| cation:proton antiporter | AMED_RS41725 | Not Available | Negative | 8982459 - 8983613 | 39528.1 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
