Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminoglycoside phosphotransferase family protein | AMED_RS41635 | Not Available | Negative | 8957924 - 8958841 | 33456.8 |
| cell wall metabolism sensor histidine kinase walk | AMED_RS41640 | Not Available | Positive | 8958889 - 8959965 | 39105.6 |
| phosphopyruvate hydratase | AMED_RS41645 | Not Available | Positive | 8960079 - 8961362 | 45249.1 |
| s26 family signal peptidase | AMED_RS41650 | Not Available | Negative | 8961403 - 8961834 | 15139.6 |
| abc transporter atp-binding protein | AMED_RS41655 | Not Available | Negative | 8961831 - 8963648 | 64696.2 |
| tlpa family protein | AMED_RS41660 | Not Available | Negative | 8963651 - 8964154 | 17513.1 |
| maue/doxx family redox-associated membrane protein | AMED_RS41665 | Not Available | Negative | 8964154 - 8964654 | 17010.3 |
| hypothetical protein | AMED_RS48175 | Not Available | Negative | 8964726 - 8964893 | 6175.44 |
| tetratricopeptide repeat protein | AMED_RS41670 | Not Available | Negative | 8965114 - 8967540 | 86357.3 |
| sgnh/gdsl hydrolase family protein | AMED_RS41675 | Not Available | Negative | 8967608 - 8968774 | 40306.5 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
