Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zf-hc2 domain-containing protein | AMED_RS41585 | Not Available | Negative | 8947102 - 8947278 | 6538.69 |
| hypothetical protein | AMED_RS41590 | Not Available | Positive | 8947593 - 8947841 | 9205.18 |
| glycoside hydrolase family 19 protein | AMED_RS41595 | Not Available | Positive | 8948176 - 8949189 | 36362.7 |
| thioesterase ii family protein | AMED_RS41600 | Not Available | Negative | 8949230 - 8949976 | 26907.9 |
| carbohydrate-binding protein | AMED_RS41605 | Not Available | Negative | 8950093 - 8950911 | 28946.0 |
| arac family transcriptional regulator | AMED_RS41610 | Not Available | Negative | 8950986 - 8951813 | 30334.3 |
| thioester domain-containing protein | AMED_RS41615 | Not Available | Negative | 8952016 - 8953143 | 38627.4 |
| serine hydrolase | AMED_RS41620 | Not Available | Negative | 8953359 - 8954183 | 29544.0 |
| cellulase family glycosylhydrolase | AMED_RS41625 | Not Available | Negative | 8954296 - 8955795 | 52301.7 |
| gtp-binding protein | AMED_RS41630 | Not Available | Negative | 8956019 - 8957794 | 62664.4 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
