Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine-protein kinase | AMED_RS04080 | Not Available | Negative | 846456 - 847568 | 38833.9 |
| serine/threonine-protein kinase | AMED_RS04085 | Not Available | Negative | 847582 - 849201 | 56439.8 |
| hypothetical protein | AMED_RS04090 | Not Available | Negative | 849417 - 849830 | 14725.6 |
| hypothetical protein | AMED_RS04095 | Not Available | Negative | 850091 - 851671 | 54639.8 |
| hypothetical protein | AMED_RS04100 | Not Available | Negative | 852006 - 852320 | 10508.9 |
| chorismate mutase | AMED_RS04105 | Not Available | Negative | 852385 - 852681 | 10838.1 |
| duf1707 domain-containing protein | AMED_RS04110 | Not Available | Negative | 852843 - 853268 | 15609.9 |
| dna helicase pcra | AMED_RS04115 | Not Available | Positive | 853435 - 855849 | 88144.2 |
| m23 family metallopeptidase | AMED_RS04120 | Not Available | Negative | 856807 - 857487 | 22939.8 |
| hypothetical protein | AMED_RS04125 | Not Available | Positive | 858417 - 860324 | 62422.8 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
