Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gh1 family beta-glucosidase | AMED_RS41535 | Not Available | Negative | 8936429 - 8937823 | 49725.3 |
| carbohydrate abc transporter permease | AMED_RS41540 | Not Available | Negative | 8937820 - 8938644 | 29314.2 |
| carbohydrate abc transporter permease | AMED_RS41545 | Not Available | Negative | 8938641 - 8939546 | 33300.4 |
| extracellular solute-binding protein | AMED_RS41550 | Not Available | Negative | 8939553 - 8940809 | 45492.6 |
| luxr c-terminal-related transcriptional regulator | AMED_RS41555 | Not Available | Negative | 8940819 - 8941397 | 20333.7 |
| glycoside hydrolase family 3 n-terminal domain-containing protein | AMED_RS41560 | Not Available | Positive | 8941581 - 8942729 | 39565.3 |
| oxidoreductase | AMED_RS41565 | Not Available | Positive | 8943255 - 8944124 | 30460.4 |
| hypothetical protein | AMED_RS41570 | Not Available | Positive | 8944168 - 8944575 | 15339.2 |
| mfs transporter | AMED_RS41575 | Not Available | Negative | 8944553 - 8945902 | 45241.3 |
| lrp/asnc family transcriptional regulator | AMED_RS49625 | Not Available | Positive | 8946012 - 8946959 | 33230.1 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
