Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| collagen binding domain-containing protein | AMED_RS41485 | Not Available | Positive | 8920691 - 8922151 | 49918.0 |
| class f sortase | AMED_RS41490 | Not Available | Positive | 8922155 - 8922988 | 28133.7 |
| sdr family oxidoreductase | AMED_RS41495 | Not Available | Positive | 8923091 - 8925085 | 72027.7 |
| cell division protein diviva | AMED_RS41500 | Not Available | Positive | 8925191 - 8926360 | 42534.9 |
| metal-dependent hydrolase | AMED_RS41505 | Not Available | Negative | 8926551 - 8927807 | 43004.7 |
| response regulator transcription factor | AMED_RS41510 | Not Available | Negative | 8927919 - 8928521 | 21296.0 |
| wxg100 family type vii secretion target | AMED_RS41515 | Not Available | Negative | 8928568 - 8928813 | 9001.7 |
| wxg100 family type vii secretion target | AMED_RS41520 | Not Available | Negative | 8928810 - 8929055 | 9033.75 |
| btad domain-containing putative transcriptional regulator | AMED_RS41525 | Not Available | Positive | 8929325 - 8932558 | 115814.0 |
| btad domain-containing putative transcriptional regulator | AMED_RS41530 | Not Available | Positive | 8932841 - 8936470 | 130702.0 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
