Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine ammonia-lyase | AMED_RS41435 | Not Available | Negative | 8909727 - 8910929 | 41843.9 |
| hypothetical protein | AMED_RS41440 | Not Available | Positive | 8911025 - 8911297 | 8904.44 |
| tigr03618 family f420-dependent ppox class oxidoreductase | AMED_RS41445 | Not Available | Positive | 8911379 - 8911852 | 16508.6 |
| cystathionine gamma-synthase | AMED_RS41450 | Not Available | Negative | 8911856 - 8913013 | 41177.0 |
| hypothetical protein | AMED_RS41455 | Not Available | Negative | 8913295 - 8913747 | 15440.3 |
| hypothetical protein | AMED_RS41460 | Not Available | Negative | 8914091 - 8915671 | 51642.6 |
| cystathionine beta-synthase | AMED_RS41465 | Not Available | Negative | 8915801 - 8917171 | 48062.2 |
| acetyl-coa c-acetyltransferase | AMED_RS41470 | Not Available | Positive | 8917350 - 8918570 | 42533.6 |
| hypothetical protein | AMED_RS41475 | Not Available | Negative | 8918635 - 8919384 | 25516.2 |
| bax inhibitor-1/ycca family protein | AMED_RS41480 | Not Available | Negative | 8919539 - 8920372 | 29382.4 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
