Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4307 domain-containing protein | AMED_RS41385 | Not Available | Positive | 8899881 - 8900336 | 16052.3 |
| transcription elongation factor grea | AMED_RS41390 | Not Available | Positive | 8900534 - 8901037 | 18509.6 |
| hypothetical protein | AMED_RS41395 | Not Available | Positive | 8901087 - 8901899 | 29701.1 |
| lrp/asnc family transcriptional regulator | AMED_RS41400 | Not Available | Negative | 8901904 - 8902377 | 16790.5 |
| 4-hydroxyphenylpyruvate dioxygenase | AMED_RS41405 | Not Available | Positive | 8902486 - 8903685 | 44384.3 |
| ybab/ebfc family nucleoid-associated protein | AMED_RS41410 | Not Available | Positive | 8903808 - 8904344 | 19434.7 |
| type vii secretion target | AMED_RS41415 | Not Available | Positive | 8904355 - 8904663 | 10758.6 |
| hypothetical protein | AMED_RS41420 | Not Available | Positive | 8904663 - 8908211 | 122917.0 |
| hypothetical protein | AMED_RS41425 | Not Available | Positive | 8908208 - 8908762 | 20480.1 |
| hypothetical protein | AMED_RS41430 | Not Available | Positive | 8908856 - 8909689 | 30355.2 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
