Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6745 domain-containing protein | AMED_RS41340 | Not Available | Positive | 8888617 - 8889567 | 35463.8 |
| hypothetical protein | AMED_RS41345 | Not Available | Positive | 8889586 - 8890008 | 15400.6 |
| hypothetical protein | AMED_RS41350 | Not Available | Negative | 8890225 - 8890782 | 20506.0 |
| thioredoxin domain-containing protein | AMED_RS41355 | Not Available | Negative | 8890866 - 8892833 | 69977.8 |
| metal-dependent hydrolase | AMED_RS49285 | Not Available | Positive | 8893060 - 8893200 | 5137.1 |
| hypothetical protein | AMED_RS49290 | Not Available | Positive | 8894072 - 8894491 | 15179.6 |
| 3' terminal rna ribose 2'-o-methyltransferase hen1 | AMED_RS41365 | Not Available | Positive | 8894560 - 8895927 | 49812.1 |
| polynucleotide kinase-phosphatase | AMED_RS41370 | Not Available | Positive | 8895924 - 8898416 | 90456.8 |
| hypothetical protein | AMED_RS41375 | Not Available | Negative | 8898501 - 8898830 | 11121.2 |
| mycothiol conjugate amidase mca | AMED_RS41380 | Not Available | Negative | 8898827 - 8899747 | 34234.1 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
