Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS49280 | Not Available | Negative | 8876160 - 8876414 | 9015.78 |
| amidohydrolase family protein | AMED_RS41295 | Not Available | Negative | 8876439 - 8879243 | 101262.0 |
| phoh family protein | AMED_RS41300 | Not Available | Negative | 8879367 - 8880659 | 46800.1 |
| isoprenyl transferase | AMED_RS41305 | Not Available | Negative | 8881121 - 8881897 | 29167.5 |
| paqr family membrane homeostasis protein trha | AMED_RS41310 | Not Available | Positive | 8881978 - 8882652 | 24607.4 |
| hypothetical protein | AMED_RS41315 | Not Available | Negative | 8882879 - 8883229 | 11624.8 |
| carboxymuconolactone decarboxylase family protein | AMED_RS41320 | Not Available | Negative | 8883425 - 8883898 | 17028.4 |
| duf2382 domain-containing protein | AMED_RS41325 | Not Available | Positive | 8884209 - 8884970 | 28262.0 |
| acyl-coa dehydrogenase | AMED_RS41330 | Not Available | Negative | 8885038 - 8886927 | 68404.1 |
| glycosyl hydrolase family 28 protein | AMED_RS41335 | Not Available | Negative | 8887008 - 8888381 | 48285.1 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
