Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class ii fumarate hydratase | AMED_RS41245 | Not Available | Positive | 8867665 - 8869062 | 48930.1 |
| helix-turn-helix domain-containing protein | AMED_RS41250 | Not Available | Positive | 8869062 - 8869913 | 31573.8 |
| atp-dependent dna ligase | AMED_RS41255 | Not Available | Positive | 8869945 - 8871477 | 54601.6 |
| hypothetical protein | AMED_RS41260 | Not Available | Positive | 8871692 - 8872132 | 15897.2 |
| pr6pr family membrane protein | AMED_RS41265 | Not Available | Positive | 8872224 - 8872841 | 22092.4 |
| mbl fold metallo-hydrolase | AMED_RS41270 | Not Available | Positive | 8872838 - 8873461 | 21669.4 |
| hypothetical protein | AMED_RS41275 | Not Available | Negative | 8873546 - 8873830 | 9547.36 |
| hypothetical protein | AMED_RS41280 | Not Available | Negative | 8874023 - 8874211 | 6445.02 |
| duf309 domain-containing protein | AMED_RS41285 | Not Available | Negative | 8874205 - 8874672 | 16914.9 |
| guab1 family imp dehydrogenase-related protein | AMED_RS41290 | Not Available | Positive | 8874716 - 8876155 | 49805.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
