Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna recombination protein rmuc | AMED_RS41195 | Not Available | Positive | 8858380 - 8859294 | 32403.7 |
| duf6542 domain-containing protein | AMED_RS41200 | Not Available | Positive | 8859984 - 8860634 | 22718.7 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | AMED_RS41205 | Not Available | Negative | 8860897 - 8861892 | 35699.3 |
| lipid droplet-associated protein | AMED_RS41210 | Not Available | Positive | 8862035 - 8862787 | 27044.5 |
| exodeoxyribonuclease vii large subunit | AMED_RS41215 | Not Available | Positive | 8862784 - 8864031 | 45075.1 |
| hypothetical protein | AMED_RS41220 | Not Available | Positive | 8864028 - 8864432 | 14386.1 |
| exodeoxyribonuclease vii small subunit | AMED_RS41225 | Not Available | Positive | 8864429 - 8864650 | 8115.4 |
| class ii fructose-bisphosphatase | AMED_RS41230 | Not Available | Positive | 8864736 - 8865785 | 36759.0 |
| trypsin-like serine protease | AMED_RS41235 | Not Available | Positive | 8865794 - 8866552 | 25464.2 |
| nad(p)/fad-dependent oxidoreductase | AMED_RS41240 | Not Available | Negative | 8866553 - 8867542 | 34303.1 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
