Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine abc transporter substrate binding subunit | AMED_RS41145 | Not Available | Negative | 8847911 - 8848960 | 37190.7 |
| 4a-hydroxytetrahydrobiopterin dehydratase | AMED_RS41150 | Not Available | Positive | 8849121 - 8849405 | 10261.9 |
| hypothetical protein | AMED_RS41155 | Not Available | Negative | 8849813 - 8850145 | 11754.0 |
| hypothetical protein | AMED_RS41160 | Not Available | Negative | 8850148 - 8850615 | 16880.0 |
| arsr family transcriptional regulator | AMED_RS41165 | Not Available | Negative | 8850612 - 8851202 | 21273.6 |
| redox-regulated atpase ychf | AMED_RS41170 | Not Available | Negative | 8851268 - 8852350 | 39072.6 |
| dna-3-methyladenine glycosylase 2 family protein | AMED_RS41175 | Not Available | Positive | 8852453 - 8853892 | 51497.0 |
| duf1737 domain-containing protein | AMED_RS41180 | Not Available | Negative | 8853849 - 8854040 | 6935.16 |
| aaa family atpase | AMED_RS41185 | Not Available | Negative | 8854062 - 8857013 | 106274.0 |
| exonuclease sbccd subunit d | AMED_RS41190 | Not Available | Negative | 8857010 - 8858161 | 41133.8 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
