Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dinb family protein | AMED_RS04030 | Not Available | Negative | 838219 - 838764 | 20381.3 |
| glutamine-hydrolyzing gmp synthase | AMED_RS04035 | Not Available | Positive | 838871 - 840427 | 55882.4 |
| hypothetical protein | AMED_RS04040 | Not Available | Negative | 840492 - 840734 | 8503.26 |
| pspc domain-containing protein | AMED_RS04045 | Not Available | Negative | 840727 - 842016 | 44056.3 |
| sdr family oxidoreductase | AMED_RS04050 | Not Available | Negative | 842099 - 842296 | 7130.3 |
| 3-ketoacyl-acp reductase | AMED_RS04055 | Not Available | Negative | 842293 - 842496 | 6962.26 |
| atp-binding protein | AMED_RS04060 | Not Available | Positive | 842555 - 843862 | 45770.0 |
| response regulator transcription factor | AMED_RS04065 | Not Available | Positive | 843870 - 844550 | 24732.6 |
| dmt family transporter | AMED_RS04070 | Not Available | Negative | 844547 - 845452 | 31193.3 |
| lysr family transcriptional regulator | AMED_RS04075 | Not Available | Positive | 845557 - 846459 | 31907.6 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
