Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS41050 | Not Available | Negative | 8824942 - 8825334 | 13603.4 |
| n-acetyl-1-d-myo-inositol-2-amino-2-deoxy-alpha- d-glucopyranoside deacetylase | AMED_RS41055 | Not Available | Negative | 8825331 - 8826173 | 29144.5 |
| abc transporter atp-binding protein | AMED_RS41060 | Not Available | Positive | 8826287 - 8828068 | 63891.4 |
| abc transporter permease | AMED_RS41065 | Not Available | Negative | 8828242 - 8829258 | 36640.4 |
| abc transporter permease | AMED_RS41070 | Not Available | Negative | 8829339 - 8830268 | 33058.8 |
| abc transporter permease | AMED_RS41075 | Not Available | Negative | 8830261 - 8831277 | 36475.4 |
| abc transporter family substrate-binding protein | AMED_RS41080 | Not Available | Negative | 8831464 - 8833275 | 64973.0 |
| abc transporter family substrate-binding protein | AMED_RS41085 | Not Available | Negative | 8833566 - 8835302 | 60333.8 |
| translational gtpase typa | AMED_RS41090 | Not Available | Negative | 8835683 - 8837608 | 69751.5 |
| hypothetical protein | AMED_RS48165 | Not Available | Positive | 8837803 - 8837952 | 5479.27 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
