Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannose-6-phosphate isomerase, class i | AMED_RS41000 | Not Available | Negative | 8814155 - 8815384 | 44189.9 |
| hypothetical protein | AMED_RS41005 | Not Available | Negative | 8815439 - 8816536 | 37644.1 |
| trm112 family protein | AMED_RS41010 | Not Available | Negative | 8816520 - 8816741 | 7528.77 |
| phosphomannomutase/phosphoglucomutase | AMED_RS41015 | Not Available | Negative | 8816823 - 8818178 | 47528.3 |
| duf3499 domain-containing protein | AMED_RS41020 | Not Available | Negative | 8818259 - 8818612 | 12296.5 |
| metallopeptidase family protein | AMED_RS41025 | Not Available | Positive | 8818690 - 8819154 | 17110.3 |
| glycosyltransferase family 2 protein | AMED_RS41030 | Not Available | Negative | 8819222 - 8822485 | 111260.0 |
| whib family transcriptional regulator | AMED_RS41035 | Not Available | Negative | 8822771 - 8823058 | 10872.7 |
| site-2 protease family protein | AMED_RS41040 | Not Available | Positive | 8823323 - 8824084 | 26907.3 |
| hypothetical protein | AMED_RS41045 | Not Available | Negative | 8824173 - 8824949 | 27933.7 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
